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- BEAST Software - Bayesian Evolutionary Analysis Sampling Trees | BEAST . . .
BEAST is a cross-platform program for Bayesian analysis of molecular sequences using MCMC It is entirely orientated towards rooted, time-measured phylogenies inferred using strict or relaxed molecular clock models
- Estimating rates and dates from time-stamped sequences | BEAST . . .
To inform BEAUti BEAST about the sampling dates of the sequences, go to the Tips menu and select the “Use tip dates” option By default all the taxa are assumed to have a date of zero (i e the sequences are assumed to be sampled at the same time; BEAST considers the present or most recent sampling time as time 0)
- FigTree | BEAST Documentation
FigTree is a program for viewing trees, including summary information produced by TreeAnnotator, and producing publication quality figures
- BEAGLE | BEAST Documentation
Using BEAGLE with BEAST BEAGLE is a high-performance library that can perform the core calculations at the heart of most Bayesian and Maximum Likelihood phylogenetics package It can make use of highly-parallel processors such as those in graphics processing units (GPUs) found in many PCs The current version of BEAGLE will only work with BEAST v1 6 or later Downloading and installing BEAGLE
- BEAUti The BEAST | BEAST Documentation
The BEAUti The BEAST software packageBayesian Evolutionary Analysis Utility (BEAUti) BEAUti is a graphical user-interface (GUI) application for generating BEAST XML files It is distributed in the same package as BEAST To download it, go to the BEAST download page
- Beast Forum - Something Awful
Howdy folks A few years ago, we were first acquainted with the caring pet-lovers over at Beast Forum, so I figured that we should check back in with them and see if having sex with pigs and chickens is still as great as ever Why do girls always want to tell me about their dreams, regardless of whether they contain dogsex or not It brings families together I tells ya What? No option for
- TempEst | BEAST Documentation
TempEst (formerly known as ‘Path-O-Gen’) is a tool for investigating the temporal signal and ‘clocklikeness’ of molecular phylogenies It can read and analyse contemporaneous trees (where all sequences have been collected at the same time) and dated-tip trees (where sequences have been collected at different dates) It is designed for analysing trees that have not been inferred under a
- Installing BEAST | BEAST Documentation
Installing BEAST BEAST has been developed in Java, which allows the same code to run on any platform that has the Java software installed We have also created packages for each of the common operating systems to provide a user-interface that is ‘native’ and familiar Latest Version
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